ImageJ

ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. Downloadable distributions are available for Windows, Mac OS, Mac OS X and Linux.
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Topics (17644)
Replies Last Post Views
has anyone ever used ImageJ to read micro-CT scan data ? by Maura Monville
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by Herbie-3
Using Jama in a macro by matheus_viana
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by matheus_viana
Window>Show ImageJ by dscho
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by dscho
extracting fundus mask by Murat Kucukevciliogl...
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by Murat Kucukevciliogl...
Fiji update by dscho
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by dscho
Quantifying Myotubes and Nuclei Count by Mevan Siriwardane
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by gankaku
NonBlockingGenericDialog in the Window menu by Ryota Homma
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by Rasband, Wayne (NIH/...
TrakEM empty cache by Luisa de Vivo
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by Luisa de Vivo
Isolating an object in image by Sophie Lorent
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by ctrueden
retrieve specific string/number from dialog box by mmettlen
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by Christine Labno-2
3D filtering shape by Luciana Ferreira
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by Luciana Ferreira
ImageListener by Philippe GENDRE
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by Michael Schmid
I need to copy and crop mutiple ROI from each image by Jasvinder Ahuja
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by Antoinette
Batch cropping a stack of visually overlaid images? by Miles Wolbe
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by Antoinette
Appropriate Thresholding by Angus G
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by Angus G
Edit->Draw vs. Image->Overlay->Add Selection... by Neil Fazel
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by Neil Fazel
Use macro to get maximum value and coordinate position by xiaoleiwang
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by Michael Schmid
Quantification of Myotube and Nuclei Count by Mevan Siriwardane
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by Mevan Siriwardane
Appropriate Choice of Threshold by ABGane
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by ABGane
Possible bug in "Make Substack..." by jbalsam
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by Rasband, Wayne (NIH/...
Draw circles using ultimate point data by jmcginnity
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by jomwalke
Fluorescence Intensity Comparison by streptopelia
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by streptopelia
Re: Downloading Coloc2 plug-in for FIJI by dscho
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by dscho
ij-dcraw plugin dcraw options by SebbyNC
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by SebbyNC
Contributing a new writer plugin by Brian Long
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by Mark Hiner
How to change the associated slice number of a ROI? by Stoyan Pavlov
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by Stoyan Pavlov
open 36 bit RGB image by streptopelia
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by streptopelia
Image registration between two grids by Street, Jonathan (NI...
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by Street, Jonathan (NI...
how to copy ROI to new image by Alex Chekholko
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by sankar.lp.gym
plugin output, ResultsTable vs. List by Rainer M. Engel
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by Rainer M. Engel
Immunohistochemistry staining by Caterina Conti
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by carlo bianco
3D line/axon/Simple neurite tracer/blobs along line/axon by Savani Anbalagan
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by Savani Anbalagan
Re: [fiji-devel] TransformJ Affine without changing image size by dscho
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by samjlord
extracting nucleus from biological 3D image by sravan
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by gankaku
Series Labeler update by dscho
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by dscho
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